Databases Biologiques
Databases Bioinformatiques
Exemples de Databases Bioinformatiques:
Database Bioinformatique EDGEdb C. elegans
Differential Gene Expression DataBase
This project aims to find novel transcription factors and their target genes in C. elegans.
Database Bioinformatique EDGEdb :
- contains the genome from C. elegans and the annotated genes
- displays gene structure information and location (with Graphical interface)
- tracks C. elegans genome promoter region
- allows data management for transcription factor
- interface to enter interaction / expression data and visualization tools.
- contains information from the literature as well as information obtained from the experiments performed in the lab
- series of tools that allow the members of the lab to enter the data in a high-throughput fashion.
- search tools to query genes, ORFs, operons and Transcription factors
- displays promoter info and TF info- interface to enter clones/yeast localization and add vector/strain page
White paper EDGEdb 2047 KB
Database Bioinformatique Viral Orfeome
The aim of this project is to study virus protein interaction with host proteins.
Database Bioinformatique Viral Orfeome :
- contains genome sequences of all viruses from Genbank + different strains
- displays gene structure information and location (with Graphical interface of all viruses genomes)
- allows the design of primers on any ORF (Open Reading Frame), primers management and visualization
- tracks ORFs cloning from all viruses
- tracks protein-protein interaction study
- search tools to query viruses interaction, primers, clones
White paper Viral Orfeome 1515 KB